rename lib to opengait
This commit is contained in:
darkliang
@@ -0,0 +1,276 @@
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import os
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from time import strftime, localtime
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import torch
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import numpy as np
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import torch.nn.functional as F
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from utils import get_msg_mgr, mkdir
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def cuda_dist(x, y, metric='euc'):
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x = torch.from_numpy(x).cuda()
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y = torch.from_numpy(y).cuda()
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if metric == 'cos':
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x = F.normalize(x, p=2, dim=2) # n p c
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y = F.normalize(y, p=2, dim=2) # n p c
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num_bin = x.size(1)
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n_x = x.size(0)
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n_y = y.size(0)
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dist = torch.zeros(n_x, n_y).cuda()
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for i in range(num_bin):
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_x = x[:, i, ...]
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_y = y[:, i, ...]
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if metric == 'cos':
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dist += torch.matmul(_x, _y.transpose(0, 1))
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else:
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_dist = torch.sum(_x ** 2, 1).unsqueeze(1) + torch.sum(_y ** 2, 1).unsqueeze(
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1).transpose(0, 1) - 2 * torch.matmul(_x, _y.transpose(0, 1))
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dist += torch.sqrt(F.relu(_dist))
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return 1 - dist/num_bin if metric == 'cos' else dist / num_bin
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# Exclude identical-view cases
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def de_diag(acc, each_angle=False):
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dividend = acc.shape[1] - 1.
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result = np.sum(acc - np.diag(np.diag(acc)), 1) / dividend
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if not each_angle:
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result = np.mean(result)
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return result
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# Modified From https://github.com/AbnerHqC/GaitSet/blob/master/model/utils/evaluator.py
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def identification(data, dataset, metric='euc'):
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msg_mgr = get_msg_mgr()
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feature, label, seq_type, view = data['embeddings'], data['labels'], data['types'], data['views']
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label = np.array(label)
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view_list = list(set(view))
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view_list.sort()
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view_num = len(view_list)
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# sample_num = len(feature)
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probe_seq_dict = {'CASIA-B': [['nm-05', 'nm-06'], ['bg-01', 'bg-02'], ['cl-01', 'cl-02']],
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'OUMVLP': [['00']]}
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gallery_seq_dict = {'CASIA-B': [['nm-01', 'nm-02', 'nm-03', 'nm-04']],
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'OUMVLP': [['01']]}
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if dataset not in (probe_seq_dict or gallery_seq_dict):
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raise KeyError("DataSet %s hasn't been supported !" % dataset)
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num_rank = 5
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acc = np.zeros([len(probe_seq_dict[dataset]),
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view_num, view_num, num_rank]) - 1.
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for (p, probe_seq) in enumerate(probe_seq_dict[dataset]):
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for gallery_seq in gallery_seq_dict[dataset]:
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for (v1, probe_view) in enumerate(view_list):
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for (v2, gallery_view) in enumerate(view_list):
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gseq_mask = np.isin(seq_type, gallery_seq) & np.isin(
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view, [gallery_view])
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gallery_x = feature[gseq_mask, :]
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gallery_y = label[gseq_mask]
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pseq_mask = np.isin(seq_type, probe_seq) & np.isin(
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view, [probe_view])
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probe_x = feature[pseq_mask, :]
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probe_y = label[pseq_mask]
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dist = cuda_dist(probe_x, gallery_x, metric)
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idx = dist.sort(1)[1].cpu().numpy()
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acc[p, v1, v2, :] = np.round(
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np.sum(np.cumsum(np.reshape(probe_y, [-1, 1]) == gallery_y[idx[:, 0:num_rank]], 1) > 0,
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0) * 100 / dist.shape[0], 2)
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result_dict = {}
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np.set_printoptions(precision=3, suppress=True)
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if 'OUMVLP' not in dataset:
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for i in range(1):
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msg_mgr.log_info(
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'===Rank-%d (Include identical-view cases)===' % (i + 1))
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msg_mgr.log_info('NM: %.3f,\tBG: %.3f,\tCL: %.3f' % (
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np.mean(acc[0, :, :, i]),
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np.mean(acc[1, :, :, i]),
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np.mean(acc[2, :, :, i])))
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for i in range(1):
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msg_mgr.log_info(
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'===Rank-%d (Exclude identical-view cases)===' % (i + 1))
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msg_mgr.log_info('NM: %.3f,\tBG: %.3f,\tCL: %.3f' % (
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de_diag(acc[0, :, :, i]),
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de_diag(acc[1, :, :, i]),
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de_diag(acc[2, :, :, i])))
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result_dict["scalar/test_accuracy/NM"] = de_diag(acc[0, :, :, i])
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result_dict["scalar/test_accuracy/BG"] = de_diag(acc[1, :, :, i])
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result_dict["scalar/test_accuracy/CL"] = de_diag(acc[2, :, :, i])
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np.set_printoptions(precision=2, floatmode='fixed')
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for i in range(1):
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msg_mgr.log_info(
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'===Rank-%d of each angle (Exclude identical-view cases)===' % (i + 1))
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msg_mgr.log_info('NM: {}'.format(de_diag(acc[0, :, :, i], True)))
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msg_mgr.log_info('BG: {}'.format(de_diag(acc[1, :, :, i], True)))
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msg_mgr.log_info('CL: {}'.format(de_diag(acc[2, :, :, i], True)))
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else:
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msg_mgr.log_info('===Rank-1 (Include identical-view cases)===')
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msg_mgr.log_info('NM: %.3f ' % (np.mean(acc[0, :, :, 0])))
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msg_mgr.log_info('===Rank-1 (Exclude identical-view cases)===')
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msg_mgr.log_info('NM: %.3f ' % (de_diag(acc[0, :, :, 0])))
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msg_mgr.log_info(
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'===Rank-1 of each angle (Exclude identical-view cases)===')
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msg_mgr.log_info('NM: {}'.format(de_diag(acc[0, :, :, 0], True)))
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result_dict["scalar/test_accuracy/NM"] = de_diag(acc[0, :, :, 0])
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return result_dict
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def identification_real_scene(data, dataset, metric='euc'):
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msg_mgr = get_msg_mgr()
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feature, label, seq_type = data['embeddings'], data['labels'], data['types']
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label = np.array(label)
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gallery_seq_type = {'0001-1000': ['1', '2'],
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"HID2021": ['0'], '0001-1000-test': ['0'],
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'GREW': ['01']}
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probe_seq_type = {'0001-1000': ['3', '4', '5', '6'],
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"HID2021": ['1'], '0001-1000-test': ['1'],
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'GREW': ['02']}
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num_rank = 20
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acc = np.zeros([num_rank]) - 1.
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gseq_mask = np.isin(seq_type, gallery_seq_type[dataset])
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gallery_x = feature[gseq_mask, :]
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gallery_y = label[gseq_mask]
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pseq_mask = np.isin(seq_type, probe_seq_type[dataset])
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probe_x = feature[pseq_mask, :]
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probe_y = label[pseq_mask]
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dist = cuda_dist(probe_x, gallery_x, metric)
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idx = dist.cpu().sort(1)[1].numpy()
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acc = np.round(np.sum(np.cumsum(np.reshape(probe_y, [-1, 1]) == gallery_y[idx[:, 0:num_rank]], 1) > 0,
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0) * 100 / dist.shape[0], 2)
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msg_mgr.log_info('==Rank-1==')
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msg_mgr.log_info('%.3f' % (np.mean(acc[0])))
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msg_mgr.log_info('==Rank-5==')
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msg_mgr.log_info('%.3f' % (np.mean(acc[4])))
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msg_mgr.log_info('==Rank-10==')
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msg_mgr.log_info('%.3f' % (np.mean(acc[9])))
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msg_mgr.log_info('==Rank-20==')
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msg_mgr.log_info('%.3f' % (np.mean(acc[19])))
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return {"scalar/test_accuracy/Rank-1": np.mean(acc[0]), "scalar/test_accuracy/Rank-5": np.mean(acc[4])}
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def identification_GREW_submission(data, dataset, metric='euc'):
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get_msg_mgr().log_info("Evaluating GREW")
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feature, label, seq_type, view = data['embeddings'], data['labels'], data['types'], data['views']
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label = np.array(label)
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view = np.array(view)
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gallery_seq_type = {'GREW': ['01', '02']}
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probe_seq_type = {'GREW': ['03']}
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gseq_mask = np.isin(seq_type, gallery_seq_type[dataset])
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gallery_x = feature[gseq_mask, :]
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gallery_y = label[gseq_mask]
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pseq_mask = np.isin(seq_type, probe_seq_type[dataset])
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probe_x = feature[pseq_mask, :]
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probe_y = view[pseq_mask]
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dist = cuda_dist(probe_x, gallery_x, metric)
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idx = dist.cpu().sort(1)[1].numpy()
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save_path = os.path.join(
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"GREW_result/"+strftime('%Y-%m%d-%H%M%S', localtime())+".csv")
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mkdir("GREW_result")
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with open(save_path, "w") as f:
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f.write("videoId,rank1,rank2,rank3,rank4,rank5,rank6,rank7,rank8,rank9,rank10,rank11,rank12,rank13,rank14,rank15,rank16,rank17,rank18,rank19,rank20\n")
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for i in range(len(idx)):
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r_format = [int(idx) for idx in gallery_y[idx[i, 0:20]]]
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output_row = '{}'+',{}'*20+'\n'
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f.write(output_row.format(probe_y[i], *r_format))
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print("GREW result saved to {}/{}".format(os.getcwd(), save_path))
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return
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def evaluate_HID(data, dataset, metric='euc'):
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msg_mgr = get_msg_mgr()
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msg_mgr.log_info("Evaluating HID")
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feature, label, seq_type = data['embeddings'], data['labels'], data['types']
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label = np.array(label)
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seq_type = np.array(seq_type)
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probe_mask = (label == "probe")
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gallery_mask = (label != "probe")
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gallery_x = feature[gallery_mask, :]
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gallery_y = label[gallery_mask]
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probe_x = feature[probe_mask, :]
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probe_y = seq_type[probe_mask]
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feat = np.concatenate([probe_x, gallery_x])
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dist = cuda_dist(feat, feat, metric).cpu().numpy()
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msg_mgr.log_info("Starting Re-ranking")
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re_rank = re_ranking(dist, probe_x.shape[0], k1=6, k2=6, lambda_value=0.3)
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idx = np.argsort(re_rank, axis=1)
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save_path = os.path.join(
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"HID_result/"+strftime('%Y-%m%d-%H%M%S', localtime())+".csv")
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mkdir("HID_result")
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with open(save_path, "w") as f:
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f.write("videoID,label\n")
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for i in range(len(idx)):
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f.write("{},{}\n".format(probe_y[i], gallery_y[idx[i, 0]]))
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print("HID result saved to {}/{}".format(os.getcwd(), save_path))
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return
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def re_ranking(original_dist, query_num, k1, k2, lambda_value):
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# Modified from https://github.com/michuanhaohao/reid-strong-baseline/blob/master/utils/re_ranking.py
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all_num = original_dist.shape[0]
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original_dist = np.transpose(original_dist / np.max(original_dist, axis=0))
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V = np.zeros_like(original_dist).astype(np.float16)
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initial_rank = np.argsort(original_dist).astype(np.int32)
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for i in range(all_num):
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# k-reciprocal neighbors
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forward_k_neigh_index = initial_rank[i, :k1 + 1]
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backward_k_neigh_index = initial_rank[forward_k_neigh_index, :k1 + 1]
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fi = np.where(backward_k_neigh_index == i)[0]
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k_reciprocal_index = forward_k_neigh_index[fi]
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k_reciprocal_expansion_index = k_reciprocal_index
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for j in range(len(k_reciprocal_index)):
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candidate = k_reciprocal_index[j]
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candidate_forward_k_neigh_index = initial_rank[candidate, :int(
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np.around(k1 / 2)) + 1]
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candidate_backward_k_neigh_index = initial_rank[candidate_forward_k_neigh_index,
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:int(np.around(k1 / 2)) + 1]
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fi_candidate = np.where(
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candidate_backward_k_neigh_index == candidate)[0]
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candidate_k_reciprocal_index = candidate_forward_k_neigh_index[fi_candidate]
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if len(np.intersect1d(candidate_k_reciprocal_index, k_reciprocal_index)) > 2 / 3 * len(
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candidate_k_reciprocal_index):
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k_reciprocal_expansion_index = np.append(
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k_reciprocal_expansion_index, candidate_k_reciprocal_index)
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k_reciprocal_expansion_index = np.unique(k_reciprocal_expansion_index)
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weight = np.exp(-original_dist[i, k_reciprocal_expansion_index])
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V[i, k_reciprocal_expansion_index] = weight / np.sum(weight)
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original_dist = original_dist[:query_num, ]
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if k2 != 1:
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V_qe = np.zeros_like(V, dtype=np.float16)
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for i in range(all_num):
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V_qe[i, :] = np.mean(V[initial_rank[i, :k2], :], axis=0)
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V = V_qe
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del V_qe
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del initial_rank
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invIndex = []
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for i in range(all_num):
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invIndex.append(np.where(V[:, i] != 0)[0])
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jaccard_dist = np.zeros_like(original_dist, dtype=np.float16)
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for i in range(query_num):
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temp_min = np.zeros(shape=[1, all_num], dtype=np.float16)
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indNonZero = np.where(V[i, :] != 0)[0]
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indImages = [invIndex[ind] for ind in indNonZero]
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for j in range(len(indNonZero)):
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temp_min[0, indImages[j]] = temp_min[0, indImages[j]] + np.minimum(V[i, indNonZero[j]],
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V[indImages[j], indNonZero[j]])
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jaccard_dist[i] = 1 - temp_min / (2 - temp_min)
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final_dist = jaccard_dist * (1 - lambda_value) + \
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original_dist * lambda_value
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del original_dist
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del V
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del jaccard_dist
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final_dist = final_dist[:query_num, query_num:]
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return final_dist
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